Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_103285 | Not Available | Positive | 1410647 - 1411828 | 44083.7 |
| glycosyl transferase family 2 | SAMN04487831_103286 | Not Available | Positive | 1411852 - 1412790 | 35991.2 |
| glycosyl transferase family 11 | SAMN04487831_103287 | Not Available | Positive | 1412794 - 1413732 | 36916.0 |
| glycosyltransferase family 6 | SAMN04487831_103288 | Not Available | Positive | 1413766 - 1414605 | 33200.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_103289 | Not Available | Positive | 1414618 - 1415679 | 41601.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_103290 | Not Available | Positive | 1415672 - 1416640 | 37833.1 |
| hypothetical protein | SAMN04487831_103291 | Not Available | Positive | 1416658 - 1418301 | 63716.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN04487831_103292 | Not Available | Positive | 1418313 - 1419398 | 41090.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_103293 | Not Available | Positive | 1419409 - 1420347 | 35712.0 |
| tupa-like atpgrasp | SAMN04487831_103294 | Not Available | Positive | 1420371 - 1421231 | 34569.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
