Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMN04487831_103275 | Not Available | Positive | 1396657 - 1397604 | 35503.0 |
| hypothetical protein | SAMN04487831_103276 | Not Available | Positive | 1397616 - 1400516 | 108639.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_103277 | Not Available | Negative | 1400544 - 1401707 | 43307.1 |
| glycosyl transferase family 2 | SAMN04487831_103278 | Not Available | Positive | 1401849 - 1402649 | 30855.2 |
| lysylphosphatidylglycerol synthase tm region | SAMN04487831_103279 | Not Available | Positive | 1402660 - 1403526 | 32575.6 |
| hypothetical protein | SAMN04487831_103280 | Not Available | Positive | 1403528 - 1404982 | 56714.7 |
| capsule biosynthesis phosphatase | SAMN04487831_103281 | Not Available | Positive | 1404975 - 1405367 | 15406.3 |
| hypothetical protein | SAMN04487831_103282 | Not Available | Positive | 1405383 - 1407629 | 84485.6 |
| polysaccharide deacetylase | SAMN04487831_103283 | Not Available | Positive | 1407635 - 1409350 | 65298.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_103284 | Not Available | Positive | 1409353 - 1410630 | 49850.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
