Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | SAMN04487831_103245 | Not Available | Positive | 1356752 - 1357582 | 32020.9 |
| n-acetylneuraminate synthase | SAMN04487831_103246 | Not Available | Positive | 1357586 - 1358635 | 39546.1 |
| n-acylneuraminate cytidylyltransferase | SAMN04487831_103247 | Not Available | Positive | 1358637 - 1359338 | 26117.8 |
| hypothetical protein | SAMN04487831_103248 | Not Available | Positive | 1359325 - 1360506 | 45114.0 |
| beta-lactamase superfamily domain-containing protein | SAMN04487831_103249 | Not Available | Positive | 1360485 - 1362038 | 59313.7 |
| o-antigen ligase | SAMN04487831_103250 | Not Available | Positive | 1362054 - 1363304 | 48030.9 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMN04487831_103251 | Not Available | Positive | 1363331 - 1364281 | 35550.9 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | SAMN04487831_103252 | Not Available | Positive | 1364281 - 1365654 | 52294.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_103253 | Not Available | Positive | 1365727 - 1366824 | 42641.1 |
| hypothetical protein | SAMN04487831_103254 | Not Available | Positive | 1366821 - 1367879 | 41618.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
