Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein 1 flgk | SAMN04487831_103205 | Not Available | Positive | 1312008 - 1314002 | 74490.1 |
| flagellar hook-associated protein 3 flgl | SAMN04487831_103206 | Not Available | Positive | 1314137 - 1315837 | 64128.3 |
| flagellar assembly factor fliw | SAMN04487831_103207 | Not Available | Positive | 1315866 - 1316318 | 16968.4 |
| carbon storage regulator, csra | SAMN04487831_103208 | Not Available | Positive | 1316321 - 1316542 | 8217.02 |
| flagellar protein flag | SAMN04487831_103209 | Not Available | Positive | 1316703 - 1317125 | 15093.7 |
| flagellar hook-associated protein 2 | SAMN04487831_103210 | Not Available | Positive | 1317140 - 1319308 | 78795.6 |
| flagellar protein flis | SAMN04487831_103211 | Not Available | Positive | 1319360 - 1319764 | 15423.7 |
| hypothetical protein | SAMN04487831_103212 | Not Available | Positive | 1319824 - 1320306 | 18790.7 |
| flagellin | SAMN04487831_103213 | Not Available | Positive | 1320668 - 1322170 | 53445.4 |
| hypothetical protein | SAMN04487831_103214 | Not Available | Positive | 1322311 - 1322808 | 18814.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
