Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_103195 | Not Available | Positive | 1303237 - 1303935 | 26751.8 |
| uncharacterized membrane protein yesl | SAMN04487831_103196 | Not Available | Positive | 1303938 - 1304564 | 23917.9 |
| hypothetical protein | SAMN04487831_103197 | Not Available | Positive | 1304738 - 1305040 | 11628.8 |
| methylglyoxal synthase | SAMN04487831_103198 | Not Available | Positive | 1305067 - 1305534 | 17177.7 |
| gntr family transcriptional regulator | SAMN04487831_103199 | Not Available | Positive | 1305714 - 1306100 | 14442.2 |
| abc-2 type transport system atp-binding protein | SAMN04487831_103200 | Not Available | Positive | 1306084 - 1306983 | 33599.3 |
| abc-2 type transport system permease protein | SAMN04487831_103201 | Not Available | Positive | 1306958 - 1309045 | 79570.3 |
| anti-sigma-28 factor, flgm family | SAMN04487831_103202 | Not Available | Positive | 1309299 - 1309577 | 10072.7 |
| flgn protein | SAMN04487831_103203 | Not Available | Positive | 1309597 - 1310109 | 19003.8 |
| flagellar hook-associated protein 1 flgk | SAMN04487831_103204 | Not Available | Positive | 1310152 - 1311981 | 68458.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
