Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium pump decarboxylases, gamma subunit | SAMN04487831_101111 | Not Available | Positive | 112566 - 113360 | 28609.5 |
| biotin-requiring enzyme | SAMN04487831_101112 | Not Available | Positive | 113379 - 113735 | 11490.8 |
| oxaloacetate decarboxylase, beta subunit | SAMN04487831_101113 | Not Available | Positive | 113750 - 114898 | 39911.1 |
| oxaloacetate decarboxylase, alpha subunit | SAMN04487831_101114 | Not Available | Positive | 114940 - 116358 | 52817.6 |
| transcriptional regulator, rpir family | SAMN04487831_101115 | Not Available | Positive | 116459 - 117373 | 34115.9 |
| hypothetical protein | SAMN04487831_101116 | Not Available | Positive | 117373 - 118602 | 44562.0 |
| cytidylate kinase | SAMN04487831_101117 | Not Available | Positive | 118624 - 119283 | 23821.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04487831_101118 | Not Available | Positive | 119293 - 120138 | 30755.6 |
| small subunit ribosomal protein s1 | SAMN04487831_101119 | Not Available | Positive | 120126 - 121250 | 40996.8 |
| chemotaxis protein methyltransferase cher | SAMN04487831_101120 | Not Available | Positive | 121407 - 122180 | 30220.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
