Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487831_103185 | Not Available | Positive | 1292942 - 1293739 | 29775.7 |
| protein of unknown function | SAMN04487831_103186 | Not Available | Positive | 1293853 - 1294092 | 9759.67 |
| ribosomal protein s18 acetylase rimi | SAMN04487831_103187 | Not Available | Positive | 1294124 - 1294618 | 19253.6 |
| uncharacterized protein yhff | SAMN04487831_103188 | Not Available | Positive | 1294646 - 1295110 | 17576.2 |
| hypothetical protein | SAMN04487831_103189 | Not Available | Positive | 1295122 - 1295547 | 16068.5 |
| fic family protein | SAMN04487831_103190 | Not Available | Positive | 1295771 - 1296829 | 39879.6 |
| protein of unknown function | SAMN04487831_103191 | Not Available | Positive | 1296848 - 1297786 | 35847.2 |
| amino acid transporter | SAMN04487831_103192 | Not Available | Positive | 1297995 - 1299536 | 56107.7 |
| atp-binding cassette, subfamily b | SAMN04487831_103193 | Not Available | Positive | 1299638 - 1301371 | 64437.5 |
| glucose-6-phosphate isomerase | SAMN04487831_103194 | Not Available | Positive | 1301560 - 1303143 | 57221.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
