Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | SAMN04487831_103175 | Not Available | Positive | 1283942 - 1284937 | 37060.5 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04487831_103176 | Not Available | Positive | 1284930 - 1285700 | 29011.5 |
| hypothetical protein | SAMN04487831_103177 | Not Available | Positive | 1285700 - 1286026 | 12582.1 |
| type iii pantothenate kinase | SAMN04487831_103178 | Not Available | Positive | 1286027 - 1286797 | 27910.8 |
| pp_01156 | SAMN04487831_103179 | Not Available | Positive | 1286806 - 1287789 | Not Available |
| transcription elongation factor grea | SAMN04487831_103180 | Not Available | Positive | 1287892 - 1288371 | 17875.0 |
| putative efflux protein, mate family | SAMN04487831_103181 | Not Available | Positive | 1288439 - 1289824 | 50663.9 |
| lysyl-trna synthetase, class ii | SAMN04487831_103182 | Not Available | Positive | 1289924 - 1291966 | 77027.4 |
| hypothetical protein | SAMN04487831_103183 | Not Available | Positive | 1292079 - 1292213 | 5233.28 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04487831_103184 | Not Available | Positive | 1292152 - 1292910 | 27533.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
