Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_103165 | Not Available | Positive | 1273885 - 1275024 | 43696.0 |
| arac-type dna-binding protein | SAMN04487831_103166 | Not Available | Negative | 1275021 - 1275878 | 32618.2 |
| diaminopimelate epimerase | SAMN04487831_103167 | Not Available | Positive | 1276048 - 1276881 | 30852.6 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN04487831_103168 | Not Available | Positive | 1276883 - 1278355 | 54227.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04487831_103169 | Not Available | Positive | 1278342 - 1279235 | 32283.4 |
| rhomboid protease glup | SAMN04487831_103170 | Not Available | Positive | 1279228 - 1279902 | 24668.5 |
| hypothetical protein | SAMN04487831_103171 | Not Available | Positive | 1279936 - 1280928 | 37721.0 |
| histidine triad (hit) family protein | SAMN04487831_103172 | Not Available | Positive | 1280948 - 1281358 | 14904.8 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN04487831_103173 | Not Available | Negative | 1281339 - 1282403 | 38901.2 |
| sh3 domain-containing protein | SAMN04487831_103174 | Not Available | Positive | 1282597 - 1283823 | 43210.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
