Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv leader peptidase family protein | SAMN04487831_103145 | Not Available | Positive | 1254489 - 1254884 | 14743.7 |
| hypothetical protein | SAMN04487831_103146 | Not Available | Positive | 1254905 - 1255906 | 38087.6 |
| pilus assembly protein cpaf | SAMN04487831_103147 | Not Available | Positive | 1255899 - 1257107 | 45177.3 |
| tight adherence protein b | SAMN04487831_103148 | Not Available | Positive | 1257047 - 1257802 | 28203.2 |
| type ii secretion system protein f (gspf) | SAMN04487831_103149 | Not Available | Positive | 1257831 - 1259057 | 46614.5 |
| putative flagellin, flp1-like, domain | SAMN04487831_103150 | Not Available | Positive | 1259079 - 1259270 | 7261.13 |
| hypothetical protein | SAMN04487831_103151 | Not Available | Positive | 1259270 - 1260769 | 55637.5 |
| hypothetical protein | SAMN04487831_103152 | Not Available | Positive | 1260796 - 1261734 | 35206.9 |
| type iv leader peptidase family protein | SAMN04487831_103153 | Not Available | Positive | 1261745 - 1262188 | 16054.5 |
| hypothetical protein | SAMN04487831_103154 | Not Available | Positive | 1262179 - 1262391 | 7921.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
