Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_103115 | Not Available | Positive | 1225889 - 1226545 | 25527.2 |
| spore germination protein yaah | SAMN04487831_103116 | Not Available | Positive | 1226835 - 1228565 | 63739.5 |
| l-threonylcarbamoyladenylate synthase | SAMN04487831_103117 | Not Available | Positive | 1228686 - 1229732 | 37645.9 |
| protein-tyrosine phosphatase | SAMN04487831_103118 | Not Available | Positive | 1229760 - 1230212 | 16833.1 |
| dcmp deaminase | SAMN04487831_103119 | Not Available | Positive | 1230239 - 1230724 | 18112.4 |
| putative f0f1-atpase subunit ca2+/mg2+ transporter | SAMN04487831_103120 | Not Available | Positive | 1230745 - 1231047 | 10930.4 |
| hypothetical protein | SAMN04487831_103121 | Not Available | Positive | 1231065 - 1231463 | 14725.0 |
| f-type h+-transporting atpase subunit a | SAMN04487831_103122 | Not Available | Positive | 1231502 - 1232230 | 26745.3 |
| f-type h+-transporting atpase subunit c | SAMN04487831_103123 | Not Available | Positive | 1232265 - 1232522 | 8170.25 |
| atp synthase f0 subcomplex b subunit | SAMN04487831_103124 | Not Available | Positive | 1232566 - 1233081 | 19222.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
