Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactokinase | SAMN04487831_103105 | Not Available | Positive | 1215333 - 1216502 | 42876.5 |
| carbohydrate diacid regulator | SAMN04487831_103106 | Not Available | Negative | 1216533 - 1217447 | 34908.5 |
| carbohydrate abc transporter atp-binding protein, cut1 family (tc 3.a.1.1.-) | SAMN04487831_103107 | Not Available | Negative | 1217494 - 1218600 | 40957.7 |
| c-di-amp phosphodiesterase, consists of a ggdef-like and dhh domains | SAMN04487831_103108 | Not Available | Positive | 1218909 - 1220966 | 77523.5 |
| large subunit ribosomal protein l9 | SAMN04487831_103109 | Not Available | Positive | 1220963 - 1221412 | 16552.1 |
| replicative dna helicase | SAMN04487831_103110 | Not Available | Positive | 1221432 - 1222781 | 50594.7 |
| hybrid cluster protein-associated redox disulfide domain-containing protein | SAMN04487831_103111 | Not Available | Negative | 1222841 - 1223047 | 7287.85 |
| 4fe-4s dicluster domain-containing protein | SAMN04487831_103112 | Not Available | Positive | 1223328 - 1223498 | 5536.44 |
| adapter protein meca 1/2 | SAMN04487831_103113 | Not Available | Negative | 1223652 - 1224401 | 28144.1 |
| protein kinase domain-containing protein | SAMN04487831_103114 | Not Available | Positive | 1224640 - 1225944 | 49393.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
