Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | SAMN04487831_10395 | Not Available | Positive | 1202098 - 1203798 | 61224.6 |
| protein of unknown function duf111 | SAMN04487831_10396 | Not Available | Positive | 1203807 - 1204625 | 30148.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_10397 | Not Available | Positive | 1204710 - 1206095 | 52707.7 |
| aspartate aminotransferase | SAMN04487831_10398 | Not Available | Positive | 1206194 - 1207399 | 44959.6 |
| arac-type dna-binding protein | SAMN04487831_10399 | Not Available | Positive | 1207374 - 1208309 | 36918.1 |
| lactose/l-arabinose transport system substrate-binding protein | SAMN04487831_103100 | Not Available | Positive | 1208543 - 1209901 | 49187.7 |
| lactose/l-arabinose transport system permease protein | SAMN04487831_103101 | Not Available | Positive | 1209971 - 1210873 | 33308.4 |
| lactose/l-arabinose transport system permease protein | SAMN04487831_103102 | Not Available | Positive | 1210866 - 1211702 | 31349.2 |
| beta-galactosidase | SAMN04487831_103103 | Not Available | Positive | 1211714 - 1214731 | 115756.0 |
| hypothetical protein | SAMN04487831_103104 | Not Available | Positive | 1214800 - 1215330 | 20167.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
