Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_101101 | Not Available | Positive | 99327 - 100619 | 49472.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN04487831_101102 | Not Available | Negative | 100638 - 101918 | 44712.0 |
| prephenate dehydrogenase | SAMN04487831_101103 | Not Available | Negative | 101920 - 103020 | 40843.0 |
| elongation factor g | SAMN04487831_101104 | Not Available | Positive | 103197 - 105293 | 77491.2 |
| hypothetical protein | SAMN04487831_101105 | Not Available | Positive | 105461 - 105796 | 12557.8 |
| leucyl-trna synthetase | SAMN04487831_101106 | Not Available | Positive | 105907 - 108312 | 90272.9 |
| isocitrate dehydrogenase (nadp) | SAMN04487831_101107 | Not Available | Positive | 108375 - 109580 | 45138.9 |
| condensin subunit scpa | SAMN04487831_101108 | Not Available | Positive | 109702 - 110457 | 29420.6 |
| segregation and condensation protein b | SAMN04487831_101109 | Not Available | Positive | 110478 - 111050 | 21342.8 |
| acetyl-coa carboxylase, carboxyltransferase component | SAMN04487831_101110 | Not Available | Positive | 111213 - 112547 | 47102.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
