Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5' nucleotidase, deoxy (pyrimidine), type c protein (nt5c) | SAMN04487831_10385 | Not Available | Positive | 1192677 - 1193180 | 18861.4 |
| rubrerythrin | SAMN04487831_10386 | Not Available | Positive | 1193261 - 1193803 | 20500.1 |
| lysine decarboxylase | SAMN04487831_10387 | Not Available | Positive | 1193972 - 1195426 | 53407.4 |
| spermidine synthase | SAMN04487831_10388 | Not Available | Positive | 1195426 - 1196313 | 34611.0 |
| saccharopine dehydrogenase (nad+, l-lysine forming) | SAMN04487831_10389 | Not Available | Positive | 1196330 - 1197589 | 46922.0 |
| carboxynorspermidine decarboxylase | SAMN04487831_10390 | Not Available | Positive | 1197608 - 1198753 | 42756.2 |
| agmatine deiminase | SAMN04487831_10391 | Not Available | Positive | 1198763 - 1199857 | 40614.9 |
| n-carbamoylputrescine amidase | SAMN04487831_10392 | Not Available | Positive | 1199860 - 1200735 | 33134.4 |
| glycerate dehydrogenase | SAMN04487831_10393 | Not Available | Positive | 1200751 - 1201683 | 34482.3 |
| hypothetical protein | SAMN04487831_10394 | Not Available | Positive | 1201760 - 1201942 | 7127.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
