Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiator protein a (repa) n-terminus | SAMN04487831_10375 | Not Available | Positive | 1185492 - 1186361 | 33571.2 |
| hypothetical protein | SAMN04487831_10376 | Not Available | Positive | 1186429 - 1186938 | 20670.6 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04487831_10377 | Not Available | Positive | 1187088 - 1188119 | 40472.8 |
| hypothetical protein | SAMN04487831_10378 | Not Available | Positive | 1188335 - 1188499 | 5941.21 |
| uncharacterized membrane protein ysda, duf1294 family | SAMN04487831_10379 | Not Available | Positive | 1188644 - 1188913 | 10150.1 |
| hypothetical protein | SAMN04487831_10380 | Not Available | Positive | 1188985 - 1189470 | 18773.3 |
| sugar fermentation stimulation protein a | SAMN04487831_10381 | Not Available | Positive | 1189471 - 1190121 | 24432.6 |
| helix-turn-helix domain-containing protein | SAMN04487831_10382 | Not Available | Negative | 1190241 - 1190750 | 18920.4 |
| hypothetical protein | SAMN04487831_10383 | Not Available | Positive | 1190941 - 1191153 | 7827.38 |
| aldehyde dehydrogenase (nad+) | SAMN04487831_10384 | Not Available | Positive | 1191177 - 1192556 | 51812.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
