Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10365 | Not Available | Positive | 1178797 - 1179237 | 16878.2 |
| dna polymerase-3 subunit delta' | SAMN04487831_10366 | Not Available | Positive | 1179270 - 1180307 | 38801.1 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN04487831_10367 | Not Available | Positive | 1180304 - 1181182 | 33251.4 |
| trna1val (adenine37-n6)-methyltransferase | SAMN04487831_10368 | Not Available | Positive | 1181182 - 1181931 | 27948.0 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04487831_10369 | Not Available | Positive | 1181932 - 1182774 | 31311.7 |
| hypothetical protein | SAMN04487831_10370 | Not Available | Positive | 1182789 - 1183247 | 16774.7 |
| nad-dependent deacetylase | SAMN04487831_10371 | Not Available | Positive | 1183284 - 1184051 | 28704.2 |
| small subunit ribosomal protein s6 | SAMN04487831_10372 | Not Available | Positive | 1184198 - 1184488 | 11127.2 |
| single-strand dna-binding protein | SAMN04487831_10373 | Not Available | Positive | 1184513 - 1184950 | 15831.3 |
| small subunit ribosomal protein s18 | SAMN04487831_10374 | Not Available | Positive | 1184997 - 1185251 | 9727.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
