Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10355 | Not Available | Positive | 1169447 - 1170991 | 56529.5 |
| Trna-lys | Not Available | Not Available | Positive | 1171208 - 1171283 | Not Available |
| trna (guanine-n7-)-methyltransferase | SAMN04487831_10357 | Not Available | Negative | 1171543 - 1172187 | 24999.6 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04487831_10358 | Not Available | Positive | 1172343 - 1173734 | 51710.6 |
| hypothetical protein | SAMN04487831_10359 | Not Available | Negative | 1173863 - 1174375 | 19569.6 |
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN04487831_10360 | Not Available | Positive | 1174570 - 1175202 | 24895.9 |
| hypothetical protein | SAMN04487831_10361 | Not Available | Positive | 1175202 - 1176056 | 33401.0 |
| molybdopterin-guanine dinucleotide biosynthesis protein a | SAMN04487831_10362 | Not Available | Negative | 1176074 - 1176691 | 23642.2 |
| arginine/lysine/ornithine decarboxylase | SAMN04487831_10363 | Not Available | Positive | 1176791 - 1178158 | 49994.9 |
| guanylate kinase | SAMN04487831_10364 | Not Available | Positive | 1178204 - 1178788 | 22698.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
