Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna modification gtpase | SAMN04487831_10345 | Not Available | Positive | 1160478 - 1161848 | 50591.3 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN04487831_10346 | Not Available | Positive | 1161868 - 1163748 | 69645.3 |
| 16s rrna (guanine527-n7)-methyltransferase | SAMN04487831_10347 | Not Available | Positive | 1163820 - 1164539 | 26561.1 |
| hypothetical protein | SAMN04487831_10348 | Not Available | Positive | 1164608 - 1165114 | 19678.6 |
| chromosome partitioning protein | SAMN04487831_10349 | Not Available | Positive | 1165415 - 1166185 | 28092.7 |
| chromosome partitioning protein, parb family | SAMN04487831_10350 | Not Available | Positive | 1166188 - 1167081 | 33892.0 |
| protein of unknown function | SAMN04487831_10351 | Not Available | Positive | 1167118 - 1167612 | 18542.7 |
| protein of unknown function | SAMN04487831_10352 | Not Available | Positive | 1167612 - 1168481 | 33616.4 |
| Trna-arg | Not Available | Not Available | Positive | 1168541 - 1168614 | Not Available |
| flagellar motor switch protein flin/fliy | SAMN04487831_10354 | Not Available | Positive | 1168826 - 1169437 | 22108.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
