Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosyl-trna synthetase | SAMN04487831_10325 | Not Available | Negative | 1139595 - 1140815 | 45703.9 |
| Trna-cys | Not Available | Not Available | Positive | 1140909 - 1140979 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 1140997 - 1141084 | Not Available |
| oligopeptide transport system substrate-binding protein | SAMN04487831_10328 | Not Available | Negative | 1141237 - 1142973 | 63360.2 |
| oligopeptide transport system atp-binding protein | SAMN04487831_10329 | Not Available | Negative | 1143055 - 1144035 | 36783.6 |
| oligopeptide transport system atp-binding protein | SAMN04487831_10330 | Not Available | Negative | 1144038 - 1145036 | 36805.8 |
| oligopeptide transport system permease protein | SAMN04487831_10331 | Not Available | Negative | 1145051 - 1146133 | 39569.4 |
| oligopeptide transport system permease protein | SAMN04487831_10332 | Not Available | Negative | 1146148 - 1147062 | 33380.1 |
| fumarate hydratase subunit beta | SAMN04487831_10333 | Not Available | Negative | 1147091 - 1147642 | 19816.0 |
| fumarate hydratase subunit alpha | SAMN04487831_10334 | Not Available | Negative | 1147642 - 1148484 | 30265.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
