Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | SAMN04487831_1034 | Not Available | Negative | 1113777 - 1115672 | 73350.7 |
| hypothetical protein | SAMN04487831_1035 | Not Available | Negative | 1115706 - 1118336 | 97399.9 |
| predicted purr-regulated permease perm | SAMN04487831_1036 | Not Available | Negative | 1118440 - 1119762 | 50153.9 |
| aconitate hydratase | SAMN04487831_1037 | Not Available | Negative | 1119780 - 1122065 | 83008.0 |
| hypothetical protein | SAMN04487831_1038 | Not Available | Negative | 1122087 - 1122851 | 29214.1 |
| trna(adenine34) deaminase | SAMN04487831_10310 | Not Available | Negative | 1123141 - 1123680 | 20530.0 |
| pyruvate formate lyase activating enzyme | SAMN04487831_10311 | Not Available | Positive | 1123780 - 1124475 | 25978.4 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04487831_10312 | Not Available | Positive | 1124500 - 1125048 | 21550.2 |
| glycosidase | SAMN04487831_10313 | Not Available | Negative | 1125049 - 1126338 | 49586.5 |
| putative membrane protein | SAMN04487831_10314 | Not Available | Negative | 1126412 - 1128565 | 78953.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
