Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04487831_102402 | Not Available | Negative | 1097850 - 1098797 | 36138.8 |
| signal transduction histidine kinase | SAMN04487831_102403 | Not Available | Positive | 1098939 - 1101278 | 87914.5 |
| hypothetical protein | SAMN04487831_102404 | Not Available | Positive | 1101403 - 1101642 | 8724.65 |
| acyl-coa thioester hydrolase | SAMN04487831_102405 | Not Available | Negative | 1101713 - 1102168 | 17448.9 |
| hypothetical protein | SAMN04487831_102406 | Not Available | Positive | 1102870 - 1103667 | 31157.8 |
| butyryl-coa:acetate coa-transferase | SAMN04487831_102407 | Not Available | Positive | 1103771 - 1105111 | 49084.5 |
| hypothetical protein | SAMN04487831_102408 | Not Available | Positive | 1105300 - 1107195 | 68746.5 |
| lpxtg-motif cell wall anchor domain-containing protein | SAMN04487831_102409 | Not Available | Positive | 1107406 - 1111014 | 132621.0 |
| colicin v production protein | SAMN04487831_1032 | Not Available | Negative | 1111803 - 1112492 | 25143.2 |
| hypothetical protein | SAMN04487831_1033 | Not Available | Negative | 1112494 - 1113711 | 45955.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
