Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l7ae | SAMN04487831_10191 | Not Available | Positive | 88083 - 88388 | 10907.2 |
| translation initiation factor if-2 | SAMN04487831_10192 | Not Available | Positive | 88405 - 91092 | 98848.0 |
| ribosome-binding factor a | SAMN04487831_10193 | Not Available | Positive | 91092 - 91466 | 13906.8 |
| phosphoesterase recj domain-containing protein | SAMN04487831_10194 | Not Available | Positive | 91480 - 92457 | 36061.9 |
| trna pseudouridine55 synthase | SAMN04487831_10195 | Not Available | Positive | 92457 - 93362 | 33184.6 |
| riboflavin kinase / fmn adenylyltransferase | SAMN04487831_10196 | Not Available | Positive | 93365 - 94285 | 34981.1 |
| sh3 domain-containing protein | SAMN04487831_10197 | Not Available | Positive | 94372 - 95442 | 38482.0 |
| sec-c motif-containing protein | SAMN04487831_10198 | Not Available | Positive | 95536 - 96045 | 19705.7 |
| hypothetical protein | SAMN04487831_10199 | Not Available | Positive | 96182 - 97783 | 60625.1 |
| beta-xylosidase | SAMN04487831_101100 | Not Available | Positive | 97816 - 99312 | 57671.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
