Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Roseovarius
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Roseovarius |
| Species | Roseovarius lutimaris |
| Strain | strain DSM 28463 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
857168 bp
Thymine Count
862032 bp
Guanine Count
1287076 bp
Cytosine Count
1277389 bp
Genome Length
4283675 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux pump | SAMN04487859_10127 | Not Available | Negative | 27509 - 31300 | 136632.0 |
| membrane fusion protein, multidrug efflux system | SAMN04487859_10128 | Not Available | Negative | 31297 - 32526 | 43232.6 |
| hypothetical protein | SAMN04487859_10129 | Not Available | Positive | 32729 - 33436 | 25000.8 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN04487859_10130 | Not Available | Positive | 33503 - 34831 | 45995.6 |
| gtp-binding protein | SAMN04487859_10131 | Not Available | Positive | 34885 - 36348 | 53925.0 |
| hypothetical protein | SAMN04487859_10132 | Not Available | Negative | 36372 - 37100 | 25561.0 |
| seryl-trna synthetase | SAMN04487859_10133 | Not Available | Negative | 37084 - 38376 | 46673.4 |
| pentapeptide repeat-containing protein | SAMN04487859_10134 | Not Available | Negative | 38512 - 39792 | 46382.4 |
| protein translocase subunit yajc | SAMN04487859_10135 | Not Available | Positive | 39990 - 40271 | 10430.0 |
| protein translocase subunit secf/protein translocase subunit secd | SAMN04487859_10136 | Not Available | Positive | 40311 - 42947 | 94917.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
