Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Roseovarius
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Roseovarius |
| Species | Roseovarius lutimaris |
| Strain | strain DSM 28463 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
857168 bp
Thymine Count
862032 bp
Guanine Count
1287076 bp
Cytosine Count
1277389 bp
Genome Length
4283675 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, xre family with cupin sensor | SAMN04487859_1524 | Not Available | Negative | 4213643 - 4214212 | 21538.5 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN04487859_1525 | Not Available | Positive | 4214926 - 4215846 | 33288.2 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04487859_1526 | Not Available | Positive | 4215909 - 4216382 | 17723.4 |
| trap transporter, dctm subunit | SAMN04487859_1527 | Not Available | Positive | 4216414 - 4217706 | 45115.4 |
| d-amino-acid dehydrogenase | SAMN04487859_1528 | Not Available | Positive | 4217835 - 4219085 | 45031.0 |
| integrase core domain-containing protein | SAMN04487859_1529 | Not Available | Negative | 4219371 - 4219576 | 7947.42 |
| putative transposase | SAMN04487859_1531 | Not Available | Positive | 4219577 - 4219833 | 9741.61 |
| hypothetical protein | SAMN04487859_1532 | Not Available | Positive | 4219951 - 4222209 | 85183.0 |
| hypothetical protein | SAMN04487859_1533 | Not Available | Positive | 4222433 - 4223464 | 37887.6 |
| hypothetical protein | SAMN04487859_1534 | Not Available | Negative | 4223452 - 4223670 | 8440.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
