Roseovarius lutimaris strain DSM 28463

ovoidaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius lutimaris strain DSM 28463 is a Gram-negative, aerobic bacterium characterized by its ovoid shape. This organism is classified as mesophilic, with an optimal growth temperature of 29°C, indicating a preference for moderate temperature conditions. The genomic data for Roseovarius lutimaris strain DSM 28463 is accessible under the accession number FOVP00000000.1, which provides insights into its genetic makeup. Notably, this strain possesses a single replicon, suggesting a streamlined genomic structure that may contribute to its adaptability in various environments. The aerobic nature of Roseovarius lutimaris indicates its reliance on oxygen for growth and metabolism, which positions it within ecological niches where oxygen is available. This trait is essential for understanding its potential roles in biogeochemical cycles, particularly in marine environments where members of the Roseovarius genus are often found. In summary, Roseovarius lutimaris strain DSM 28463 exemplifies the characteristics typical of mesophilic, aerobic bacteria and highlights the importance of temperature and oxygen levels in its ecological distribution and functional roles within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius lutimaris
Strainstrain DSM 28463

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius lutimaris strain DSM 28463 genome assembly, contig:

Gene Summary

Adenine Count

857168 bp

Thymine Count

862032 bp

Guanine Count

1287076 bp

Cytosine Count

1277389 bp

Genome Length

4283675 bp

Protein-coding Genes

4162 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine hydroxymethyltransferaseSAMN04487859_14119Not AvailableNegative4100234 - 410154146445.2
nad+ kinaseSAMN04487859_14120Not AvailablePositive4101717 - 410247827726.4
transposaseSAMN04487859_1421Not AvailableNegative4102651 - 41028969118.06
short chain dehydrogenaseSAMN04487859_1422Not AvailableNegative4103025 - 410344114339.2
trap transporter, dctm subunitSAMN04487859_1423Not AvailableNegative4103551 - 410486147194.6
tripartite atp-independent transporter, dctq componentSAMN04487859_1424Not AvailableNegative4104867 - 410540019910.6
trap-type c4-dicarboxylate transport system, substrate-binding proteinSAMN04487859_1425Not AvailableNegative4105467 - 410644735238.6
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN04487859_1426Not AvailableNegative4106516 - 410686913006.3
gamma-glutamyltranspeptidase / glutathione hydrolaseSAMN04487859_1427Not AvailableNegative4107021 - 410881464634.0
xaa-pro dipeptidaseSAMN04487859_1428Not AvailableNegative4108843 - 411006945884.0

Displaying genes 4031 – 4040 of 4233 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.