Roseovarius lutimaris strain DSM 28463

ovoidaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius lutimaris strain DSM 28463 is a Gram-negative, aerobic bacterium characterized by its ovoid shape. This organism is classified as mesophilic, with an optimal growth temperature of 29°C, indicating a preference for moderate temperature conditions. The genomic data for Roseovarius lutimaris strain DSM 28463 is accessible under the accession number FOVP00000000.1, which provides insights into its genetic makeup. Notably, this strain possesses a single replicon, suggesting a streamlined genomic structure that may contribute to its adaptability in various environments. The aerobic nature of Roseovarius lutimaris indicates its reliance on oxygen for growth and metabolism, which positions it within ecological niches where oxygen is available. This trait is essential for understanding its potential roles in biogeochemical cycles, particularly in marine environments where members of the Roseovarius genus are often found. In summary, Roseovarius lutimaris strain DSM 28463 exemplifies the characteristics typical of mesophilic, aerobic bacteria and highlights the importance of temperature and oxygen levels in its ecological distribution and functional roles within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius lutimaris
Strainstrain DSM 28463

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius lutimaris strain DSM 28463 genome assembly, contig:

Gene Summary

Adenine Count

857168 bp

Thymine Count

862032 bp

Guanine Count

1287076 bp

Cytosine Count

1277389 bp

Genome Length

4283675 bp

Protein-coding Genes

4162 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine transport system atp-binding proteinSAMN04487859_1368Not AvailablePositive4004351 - 400544240610.1
binding-protein-dependent transport system inner membrane componentSAMN04487859_1369Not AvailablePositive4005476 - 400726365431.5
alcohol dehydrogenase groes-like domain-containing proteinSAMN04487859_13610Not AvailablePositive4007287 - 40075178099.83
phenylacetaldehyde dehydrogenaseSAMN04487859_13611Not AvailablePositive4007674 - 400917653744.9
hypothetical proteinSAMN04487859_13612Not AvailablePositive4009359 - 40095145883.45
acetyl-coa c-acetyltransferaseSAMN04487859_13613Not AvailablePositive4009514 - 401070141116.2
uncharacterized ob-fold protein, contains zn-ribbon domainSAMN04487859_13614Not AvailablePositive4010698 - 401115016025.3
acetyl-coa synthetaseSAMN04487859_13615Not AvailablePositive4011147 - 401281161195.4
fucose permeaseSAMN04487859_13616Not AvailablePositive4012808 - 401403141177.8
choline dehydrogenaseSAMN04487859_13617Not AvailablePositive4014167 - 401583461671.2

Displaying genes 3931 – 3940 of 4233 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.