Roseovarius lutimaris strain DSM 28463

ovoidaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius lutimaris strain DSM 28463 is a Gram-negative, aerobic bacterium characterized by its ovoid shape. This organism is classified as mesophilic, with an optimal growth temperature of 29°C, indicating a preference for moderate temperature conditions. The genomic data for Roseovarius lutimaris strain DSM 28463 is accessible under the accession number FOVP00000000.1, which provides insights into its genetic makeup. Notably, this strain possesses a single replicon, suggesting a streamlined genomic structure that may contribute to its adaptability in various environments. The aerobic nature of Roseovarius lutimaris indicates its reliance on oxygen for growth and metabolism, which positions it within ecological niches where oxygen is available. This trait is essential for understanding its potential roles in biogeochemical cycles, particularly in marine environments where members of the Roseovarius genus are often found. In summary, Roseovarius lutimaris strain DSM 28463 exemplifies the characteristics typical of mesophilic, aerobic bacteria and highlights the importance of temperature and oxygen levels in its ecological distribution and functional roles within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius lutimaris
Strainstrain DSM 28463

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius lutimaris strain DSM 28463 genome assembly, contig:

Gene Summary

Adenine Count

857168 bp

Thymine Count

862032 bp

Guanine Count

1287076 bp

Cytosine Count

1277389 bp

Genome Length

4283675 bp

Protein-coding Genes

4162 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nhl repeat-containing proteinSAMN04487859_13122Not AvailablePositive3898155 - 389933341681.0
hydrogenase maturation protein, carbamoyltransferase hypfSAMN04487859_13123Not AvailablePositive3899333 - 390167584989.5
hydrogenase maturation protein hypcSAMN04487859_13124Not AvailablePositive3901666 - 390195910512.9
hydrogenase maturation protein hypdSAMN04487859_13125Not AvailablePositive3901956 - 390309541355.7
hydrogenase maturation protein, carbamoyl dehydratase hypeSAMN04487859_13126Not AvailablePositive3903092 - 390413836015.9
hypothetical proteinSAMN04487859_13127Not AvailablePositive3904140 - 390489226479.8
hydrogenase nickel incorporation protein hypa/hybfSAMN04487859_13128Not AvailablePositive3904892 - 39051348589.39
hydrogenase nickel incorporation protein hypbSAMN04487859_13129Not AvailablePositive3905134 - 390596129511.2
sugar-phosphate isomerase, rpib/laca/lacb familySAMN04487859_13130Not AvailablePositive3906325 - 39065467809.49
integrase core domain-containing proteinSAMN04487859_13131Not AvailableNegative3907112 - 39072987067.36

Displaying genes 3831 – 3840 of 4233 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.