Roseovarius lutimaris strain DSM 28463

ovoidaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius lutimaris strain DSM 28463 is a Gram-negative, aerobic bacterium characterized by its ovoid shape. This organism is classified as mesophilic, with an optimal growth temperature of 29°C, indicating a preference for moderate temperature conditions. The genomic data for Roseovarius lutimaris strain DSM 28463 is accessible under the accession number FOVP00000000.1, which provides insights into its genetic makeup. Notably, this strain possesses a single replicon, suggesting a streamlined genomic structure that may contribute to its adaptability in various environments. The aerobic nature of Roseovarius lutimaris indicates its reliance on oxygen for growth and metabolism, which positions it within ecological niches where oxygen is available. This trait is essential for understanding its potential roles in biogeochemical cycles, particularly in marine environments where members of the Roseovarius genus are often found. In summary, Roseovarius lutimaris strain DSM 28463 exemplifies the characteristics typical of mesophilic, aerobic bacteria and highlights the importance of temperature and oxygen levels in its ecological distribution and functional roles within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius lutimaris
Strainstrain DSM 28463

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius lutimaris strain DSM 28463 genome assembly, contig:

Gene Summary

Adenine Count

857168 bp

Thymine Count

862032 bp

Guanine Count

1287076 bp

Cytosine Count

1277389 bp

Genome Length

4283675 bp

Protein-coding Genes

4162 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN04487859_107113Not AvailableNegative1633210 - 163508767401.5
sugar transferase involved in lps biosynthesis (colanic, teichoic acid)SAMN04487859_107114Not AvailableNegative1635281 - 163590423998.8
nucleoside-diphosphate-sugar epimeraseSAMN04487859_107115Not AvailableNegative1635901 - 163674329837.1
polysaccharide export outer membrane proteinSAMN04487859_107116Not AvailablePositive1636846 - 163796439335.2
hypothetical proteinSAMN04487859_107117Not AvailableNegative1637999 - 163834913343.9
hypothetical proteinSAMN04487859_107118Not AvailableNegative1638428 - 163900921004.4
dna gyrase subunit aSAMN04487859_107119Not AvailableNegative1639169 - 1641931101530.0
usg protein (tryptophan operon, function unknown)SAMN04487859_107120Not AvailablePositive1642124 - 164239310735.7
las17-binding protein actin regulatorSAMN04487859_107121Not AvailableNegative1642455 - 164301519623.6
porphobilinogen synthaseSAMN04487859_107122Not AvailableNegative1643142 - 164414335850.9

Displaying genes 1601 – 1610 of 4233 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.