Flavobacterium ummariense strain DS-12

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Paenimyroides

Description

Flavobacterium ummariense strain DS-12 is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and non-spore-forming nature. This strain exhibits optimal growth at a temperature of 29.0°C, suggesting a preference for mesophilic environments. As a member of the genus Flavobacterium, strain DS-12 is likely to play a role in the biogeochemical cycling of organic matter, particularly in aquatic environments where such bacteria are commonly found. Its aerobic nature indicates that it requires oxygen for growth, which aligns with the typical ecological niches inhabited by Flavobacterium species, often associated with decomposing organic materials and nutrient-rich waters. Understanding the physiological traits of Flavobacterium ummariense strain DS-12 not only enhances our knowledge of microbial diversity but also underscores the importance of such bacteria in ecosystem functioning. Their role in organic matter decomposition can contribute to nutrient recycling, influencing the productivity and health of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPaenimyroides
SpeciesPaenimyroides ummariense
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium ummariense strain DS-12

Accession NumberFOVI00000000.1

Gene Summary

Adenine Count

1143058 bp

Thymine Count

1137379 bp

Guanine Count

610170 bp

Cytosine Count

603280 bp

Genome Length

3493887 bp

Protein-coding Genes

3350 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
protein of unknown functionSAMN05421741_11824Not Available-2476038 - 247638513111.5
phage protein, hk97 gp10 familySAMN05421741_11825Not Available-2476382 - 247699022739.6
phage head-tail adaptor, putative, spp1 familySAMN05421741_11826Not Available-2476983 - 247732112942.4
Dna packaging/head-tail-connectorSAMN05421741_11827Not Available-2477309 - 247785120787.7
hypothetical proteinSAMN05421741_11828Not Available-2477930 - 247835215819.6
1_nc_021804: phage capsid proteinSAMN05421741_11829Not Available-2478357 - 247966146914.9
1_nc_021804: prohead proteaseSAMN05421741_11830Not Available-2479663 - 248024722535.6
1_nc_021804: phage portal proteinSAMN05421741_11831Not Available-2480252 - 248145145160.1
hypothetical proteinSAMN05421741_11832Not Available-2481933 - 24821096740.87
Gp173SAMN05421741_11833Not Available-2482125 - 248257116511.2

Displaying genes 11 – 20 of 3451 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites