Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Erwiniaceae
Genus
Pantoea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Erwiniaceae |
| Genus | Pantoea |
| Species | Candidatus Pantoea varia |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1063156 bp
Thymine Count
1066214 bp
Guanine Count
1306430 bp
Cytosine Count
1314881 bp
Genome Length
4751258 bp
Protein-coding Genes
4295 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system atp-binding protein | SAMN05428971_0155 | Not Available | Positive | 165752 - 166735 | 36192.9 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05428971_0156 | Not Available | Positive | 166746 - 167576 | 30724.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05428971_0157 | Not Available | Positive | 167737 - 169302 | 56986.9 |
| peroxiredoxin q/bcp | SAMN05428971_0158 | Not Available | Negative | 169401 - 169868 | 17365.7 |
| glycine cleavage system transcriptional repressor | SAMN05428971_0159 | Not Available | Negative | 170020 - 170601 | 21293.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05428971_0160 | Not Available | Positive | 170745 - 171623 | 31256.8 |
| beta-barrel assembly machine subunit bamc | SAMN05428971_0161 | Not Available | Positive | 171638 - 172669 | 37727.4 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN05428971_0162 | Not Available | Positive | 172815 - 173528 | 26762.1 |
| hypothetical protein | SAMN05428971_0163 | Not Available | Positive | 173670 - 174536 | 31576.2 |
| trna(met) cytidine acetyltransferase | SAMN05428971_0164 | Not Available | Positive | 174536 - 176509 | 71703.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

