Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Halopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Halopseudomonas |
| Species | Halopseudomonas yangmingensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610189 bp
Thymine Count
632347 bp
Guanine Count
968911 bp
Cytosine Count
929217 bp
Genome Length
3141501 bp
Protein-coding Genes
2919 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease/helicase cas3 | SAMN05216217_12113 | Not Available | Positive | 2994541 - 2997273 | 100944.0 |
| crispr system cascade subunit casa | SAMN05216217_12114 | Not Available | Positive | 2997321 - 2998874 | 58182.3 |
| crispr system cascade subunit casb | SAMN05216217_12115 | Not Available | Positive | 2998871 - 2999512 | 24071.7 |
| crispr system cascade subunit casc | SAMN05216217_12116 | Not Available | Positive | 2999509 - 3000543 | 37224.0 |
| crispr system cascade subunit casd | SAMN05216217_12117 | Not Available | Positive | 3000547 - 3001314 | 28404.0 |
| crispr system cascade subunit case | SAMN05216217_12118 | Not Available | Positive | 3001311 - 3001973 | 25323.1 |
| kila-n domain-containing protein | SAMN05216217_12119 | Not Available | Positive | 3002010 - 3002837 | 31654.8 |
| crispr-associated protein, cas1 family | SAMN05216217_12120 | Not Available | Positive | 3002840 - 3003769 | 33692.9 |
| crispr-associated protein, cas2 family | SAMN05216217_12121 | Not Available | Positive | 3003769 - 3004068 | 11350.6 |
| transposase, is5 family | SAMN05216217_1221 | Not Available | Positive | 3004168 - 3004389 | 8409.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
