Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Rugamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Rugamonas |
| Species | Rugamonas rubra |
| Strain | strain ATCC 43154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1131567 bp
Thymine Count
1121852 bp
Guanine Count
2290619 bp
Cytosine Count
2282800 bp
Genome Length
6830503 bp
Protein-coding Genes
5766 genes
Non-Coding Genes
150 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN02982985_00865 | Not Available | Positive | 977541 - 978317 | 28106.1 |
| surface polysaccharide o-acyltransferase, integral membrane enzyme | SAMN02982985_00866 | Not Available | Positive | 978501 - 979751 | 45814.7 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02982985_00867 | Not Available | Negative | 979748 - 980674 | 33904.8 |
| penicillin amidase | SAMN02982985_00868 | Not Available | Negative | 980804 - 983272 | 87011.6 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN02982985_00869 | Not Available | Positive | 983471 - 983995 | 19242.8 |
| gaf domain-containing protein | SAMN02982985_00870 | Not Available | Positive | 984094 - 984597 | 17922.8 |
| response regulator receiver domain-containing protein | SAMN02982985_00871 | Not Available | Positive | 984632 - 985024 | 13844.9 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN02982985_00872 | Not Available | Positive | 985186 - 987534 | 85105.6 |
| dna-binding transcriptional regulator, lysr family | SAMN02982985_00873 | Not Available | Negative | 987617 - 988555 | 34652.9 |
| simple sugar transport system permease protein | SAMN02982985_00874 | Not Available | Negative | 988618 - 989613 | 34421.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
