Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Rugamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Rugamonas |
| Species | Rugamonas rubra |
| Strain | strain ATCC 43154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1131567 bp
Thymine Count
1121852 bp
Guanine Count
2290619 bp
Cytosine Count
2282800 bp
Genome Length
6830503 bp
Protein-coding Genes
5766 genes
Non-Coding Genes
150 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdhd protein | SAMN02982985_00835 | Not Available | Negative | 946885 - 947787 | 31907.6 |
| formate dehydrogenase major subunit | SAMN02982985_00836 | Not Available | Negative | 947784 - 950615 | 101292.0 |
| nad-dependent formate dehydrogenase flavoprotein subunit | SAMN02982985_00837 | Not Available | Negative | 950612 - 952456 | 64609.1 |
| putative sos response-associated peptidase yedk | SAMN02982985_00838 | Not Available | Negative | 952593 - 953261 | 24108.7 |
| flagella basal body rod protein | SAMN02982985_00839 | Not Available | Positive | 953404 - 953766 | 11858.9 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN02982985_00840 | Not Available | Positive | 953855 - 955528 | 56979.5 |
| amino acid/amide abc transporter substrate-binding protein, haat family (tc 3.a.1.4.-) | SAMN02982985_00841 | Not Available | Positive | 955593 - 956765 | 41479.8 |
| amino acid/amide abc transporter membrane protein 1, haat family (tc 3.a.1.4.-) | SAMN02982985_00842 | Not Available | Positive | 956830 - 957702 | 29523.0 |
| branched-chain amino acid transport system permease protein | SAMN02982985_00843 | Not Available | Positive | 957699 - 958676 | 33117.5 |
| amino acid/amide abc transporter atp-binding protein 1, haat family (tc 3.a.1.4.-) | SAMN02982985_00844 | Not Available | Positive | 958669 - 959493 | 27979.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
