Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Rugamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Rugamonas |
| Species | Rugamonas rubra |
| Strain | strain ATCC 43154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1131567 bp
Thymine Count
1121852 bp
Guanine Count
2290619 bp
Cytosine Count
2282800 bp
Genome Length
6830503 bp
Protein-coding Genes
5766 genes
Non-Coding Genes
150 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pep-cterm protein-sorting domain-containing protein | SAMN02982985_00672 | Not Available | Positive | 769761 - 770540 | 28140.6 |
| methionine aminopeptidase, type i | SAMN02982985_00673 | Not Available | Positive | 770724 - 771551 | 29674.8 |
| utp--glnb (protein pii) uridylyltransferase, glnd | SAMN02982985_00674 | Not Available | Positive | 771573 - 774140 | 96451.4 |
| 23s rrna pseudouridine2604 synthase | SAMN02982985_00675 | Not Available | Positive | 774200 - 774949 | 28202.2 |
| c-di-gmp-binding flagellar brake protein ycgr, contains pilznr and pilz domains | SAMN02982985_00676 | Not Available | Positive | 775115 - 775888 | 28387.2 |
| uncharacterized conserved protein | SAMN02982985_00677 | Not Available | Negative | 775911 - 776339 | 15032.4 |
| pep-cterm protein-sorting domain-containing protein | SAMN02982985_00678 | Not Available | Positive | 776667 - 777227 | 18904.6 |
| pep-cterm protein-sorting domain-containing protein | SAMN02982985_00679 | Not Available | Positive | 777275 - 777823 | 18845.1 |
| cache domain-containing protein | SAMN02982985_00680 | Not Available | Negative | 777885 - 778373 | 17375.7 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN02982985_00681 | Not Available | Negative | 778391 - 780673 | 83087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
