Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Rugamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Rugamonas |
| Species | Rugamonas rubra |
| Strain | strain ATCC 43154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1131567 bp
Thymine Count
1121852 bp
Guanine Count
2290619 bp
Cytosine Count
2282800 bp
Genome Length
6830503 bp
Protein-coding Genes
5766 genes
Non-Coding Genes
150 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major capsid protein gp5 | SAMN02982985_04774 | Not Available | Negative | 5506799 - 5508019 | 44209.2 |
| Capsid maturation protease | SAMN02982985_04775 | Not Available | Negative | 5508086 - 5508781 | 25223.7 |
| Portal protein gp3 | SAMN02982985_04776 | Not Available | Negative | 5508750 - 5510033 | 46139.3 |
| Gp2, phage terminase, large subunit, putative | SAMN02982985_04777 | Not Available | Negative | 5510037 - 5511740 | 63689.8 |
| Putative terminase (small subunit) | SAMN02982985_04778 | Not Available | Negative | 5511733 - 5512218 | 17052.8 |
| Attr | Not Available | Not Available | Positive | 5526424 - 5526443 | Not Available |
| Integrase | SAMN02982985_05666 | Not Available | Negative | 6538731 - 6540381 | 62105.8 |
| Attl | Not Available | Not Available | Positive | 6538731 - 6538759 | Not Available |
| hypothetical protein | SAMN02982985_05667 | Not Available | Negative | 6540372 - 6540617 | 8930.72 |
| Hypothetical protein | SAMN02982985_05668 | Not Available | Negative | 6540900 - 6541166 | 9888.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
