Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Rugamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Rugamonas |
| Species | Rugamonas rubra |
| Strain | strain ATCC 43154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1131567 bp
Thymine Count
1121852 bp
Guanine Count
2290619 bp
Cytosine Count
2282800 bp
Genome Length
6830503 bp
Protein-coding Genes
5766 genes
Non-Coding Genes
150 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02982985_00381 | Not Available | Positive | 420779 - 421822 | 37403.2 |
| predicted atpase | SAMN02982985_00382 | Not Available | Positive | 421889 - 422623 | 26980.9 |
| inner membrane protein | SAMN02982985_00383 | Not Available | Positive | 422639 - 423928 | 46173.6 |
| hypothetical protein | SAMN02982985_00384 | Not Available | Negative | 424065 - 424949 | 31128.0 |
| lysr substrate binding domain-containing protein | SAMN02982985_00385 | Not Available | Positive | 425202 - 425639 | 16093.4 |
| dna-binding transcriptional regulator, lysr family | SAMN02982985_00386 | Not Available | Positive | 425636 - 426550 | 33032.2 |
| nitrate/nitrite transport system substrate-binding protein | SAMN02982985_00387 | Not Available | Positive | 426762 - 428009 | 45105.3 |
| nitrate/nitrite transport system permease protein | SAMN02982985_00388 | Not Available | Positive | 428023 - 428997 | 34286.0 |
| nitrate/nitrite transport system atp-binding protein | SAMN02982985_00389 | Not Available | Positive | 428999 - 429808 | 29203.7 |
| n6-l-threonylcarbamoyladenine synthase | SAMN02982985_00390 | Not Available | Negative | 429928 - 430968 | 37073.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
