Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Rugamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Rugamonas |
| Species | Rugamonas rubra |
| Strain | strain ATCC 43154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1131567 bp
Thymine Count
1121852 bp
Guanine Count
2290619 bp
Cytosine Count
2282800 bp
Genome Length
6830503 bp
Protein-coding Genes
5766 genes
Non-Coding Genes
150 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN02982985_00371 | Not Available | Positive | 407980 - 408501 | 18653.3 |
| integrase/recombinase xerd | SAMN02982985_00372 | Not Available | Positive | 408477 - 409379 | 33818.0 |
| hypothetical protein | SAMN02982985_00373 | Not Available | Positive | 409474 - 409656 | 6578.46 |
| acrb/acrd/acrf family protein | SAMN02982985_00374 | Not Available | Negative | 410080 - 413235 | 114727.0 |
| rnd family efflux transporter, mfp subunit | SAMN02982985_00375 | Not Available | Negative | 413239 - 414456 | 42390.3 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN02982985_00376 | Not Available | Positive | 414919 - 417483 | 92910.1 |
| endonuclease/exonuclease/phosphatase family protein | SAMN02982985_00377 | Not Available | Negative | 417520 - 418512 | 36474.4 |
| cys-trna(pro) deacylase | SAMN02982985_00378 | Not Available | Positive | 418551 - 419042 | 17671.7 |
| glycerol-3-phosphate acyltransferase plsy | SAMN02982985_00379 | Not Available | Positive | 419162 - 419806 | 22577.0 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN02982985_00380 | Not Available | Positive | 420026 - 420673 | 23641.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
