Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Rugamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Rugamonas |
| Species | Rugamonas rubra |
| Strain | strain ATCC 43154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1131567 bp
Thymine Count
1121852 bp
Guanine Count
2290619 bp
Cytosine Count
2282800 bp
Genome Length
6830503 bp
Protein-coding Genes
5766 genes
Non-Coding Genes
150 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | SAMN02982985_00361 | Not Available | Positive | 396533 - 397591 | 38238.5 |
| glucose-6-phosphate 1-epimerase | SAMN02982985_00362 | Not Available | Negative | 397693 - 398544 | 30600.9 |
| n-acetylmuramoyl-l-alanine amidase | SAMN02982985_00363 | Not Available | Negative | 398583 - 400079 | 53733.6 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN02982985_00364 | Not Available | Negative | 400076 - 400561 | 17149.6 |
| epoxyqueuosine reductase | SAMN02982985_00365 | Not Available | Positive | 400640 - 401773 | 40831.1 |
| two-component system, luxr family, response regulator dctr | SAMN02982985_00366 | Not Available | Negative | 401920 - 402507 | 21434.1 |
| two-component system, luxr family, sensor histidine kinase dcts | SAMN02982985_00367 | Not Available | Negative | 402509 - 404536 | 74207.6 |
| c4-dicarboxylate-binding protein dctp | SAMN02982985_00368 | Not Available | Positive | 404697 - 405683 | 35999.9 |
| c4-dicarboxylate transporter, dctq subunit | SAMN02982985_00369 | Not Available | Positive | 405746 - 406318 | 21192.0 |
| c4-dicarboxylate transporter, dctm subunit | SAMN02982985_00370 | Not Available | Positive | 406315 - 407595 | 45445.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
