Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Rugamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Rugamonas |
| Species | Rugamonas rubra |
| Strain | strain ATCC 43154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1131567 bp
Thymine Count
1121852 bp
Guanine Count
2290619 bp
Cytosine Count
2282800 bp
Genome Length
6830503 bp
Protein-coding Genes
5766 genes
Non-Coding Genes
150 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN02982985_00341 | Not Available | Negative | 377572 - 378483 | 33563.5 |
| thioredoxin reductase | SAMN02982985_00342 | Not Available | Negative | 378512 - 379828 | 45427.6 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN02982985_00343 | Not Available | Negative | 379825 - 380121 | 9998.27 |
| glycine/d-amino acid oxidase | SAMN02982985_00344 | Not Available | Negative | 380114 - 381250 | 39117.6 |
| 4-hydroxyproline epimerase | SAMN02982985_00345 | Not Available | Negative | 381324 - 382256 | 32544.6 |
| transcriptional regulator, arac family | SAMN02982985_00346 | Not Available | Positive | 382439 - 383206 | 28013.9 |
| gntr family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex | SAMN02982985_00347 | Not Available | Negative | 383324 - 384034 | 26350.3 |
| l-lactate dehydrogenase complex protein llde | SAMN02982985_00348 | Not Available | Positive | 384159 - 384944 | 27994.5 |
| l-lactate dehydrogenase complex protein lldg | SAMN02982985_00349 | Not Available | Positive | 384941 - 385684 | 25891.8 |
| l-lactate dehydrogenase complex protein lldf | SAMN02982985_00350 | Not Available | Positive | 385681 - 387126 | 52472.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
