Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Rugamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Rugamonas |
| Species | Rugamonas rubra |
| Strain | strain ATCC 43154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1131567 bp
Thymine Count
1121852 bp
Guanine Count
2290619 bp
Cytosine Count
2282800 bp
Genome Length
6830503 bp
Protein-coding Genes
5766 genes
Non-Coding Genes
150 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| g/u mismatch-specific uracil-dna glycosylase | SAMN02982985_00123 | Not Available | Positive | 141224 - 141844 | 21893.3 |
| clp amino terminal domain-containing protein, pathogenicity island component | SAMN02982985_00124 | Not Available | Negative | 141797 - 142318 | 18213.9 |
| homeodomain-like domain-containing protein | SAMN02982985_00125 | Not Available | Negative | 142327 - 142551 | 7909.51 |
| hypothetical protein | SAMN02982985_00126 | Not Available | Negative | 142674 - 145241 | 87015.4 |
| tetratricopeptide repeat-containing protein | SAMN02982985_00127 | Not Available | Negative | 145366 - 146541 | 43874.2 |
| protein of unknown function | SAMN02982985_00128 | Not Available | Negative | 146670 - 147869 | 43236.1 |
| hd-like signal output (hdod) domain, no enzymatic activity | SAMN02982985_00129 | Not Available | Negative | 147908 - 148831 | 33841.4 |
| methyl-accepting chemotaxis protein | SAMN02982985_00130 | Not Available | Negative | 149259 - 150956 | 58413.2 |
| cache domain | SAMN02982985_00131 | Not Available | Negative | 151023 - 151475 | 16667.4 |
| l-lysine 2,3-aminomutase (ef-p beta-lysylation pathway) | SAMN02982985_00132 | Not Available | Positive | 151744 - 153177 | 53430.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
