Ruminococcaceae bacterium D5

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Ruminococcaceae bacterium D5 is a member of the Ruminococcaceae family, which is notable for its role in the gut microbiota of various hosts. This bacterium has a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and efficiency in its ecological niche. The genome of Ruminococcaceae bacterium D5 can be accessed through the accession number FORK00000000.1. Members of the Ruminococcaceae family are known to be involved in the fermentation of complex carbohydrates, which plays a crucial role in the digestion and metabolism of dietary fibers in the gut. These bacteria contribute to the production of short-chain fatty acids, which are beneficial for gut health and have various systemic effects on host metabolism. The presence of Ruminococcaceae bacterium D5 in the gut microbiota highlights the importance of microbial diversity and composition in maintaining a balanced ecosystem within the gastrointestinal tract. This bacterium may interact with other microbial species, contributing to the overall functionality of the microbiome. Given its specific traits, Ruminococcaceae bacterium D5 could serve as a valuable model organism for studying the roles of gut microbiota in health and disease. Understanding its functions and interactions could provide insights into the complexities of microbial ecosystems and their influence on the host's metabolic processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcaceae bacterium D5 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2453 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-carbamoyl-l-amino-acid hydrolaseSAMN02910435_00877Not AvailablePositive902376 - 90357643539.4
transposase, mutator familySAMN02910435_00878Not AvailableNegative903577 - 9038079003.36
histidine phosphatase superfamily (branch 1)SAMN02910435_00879Not AvailablePositive904483 - 90562243004.3
sugar phosphate isomerase/epimeraseSAMN02910435_00880Not AvailablePositive905640 - 90646731793.8
c4-dicarboxylate transporter, dctm subunitSAMN02910435_00881Not AvailablePositive906480 - 90776044875.0
tripartite atp-independent transporter solute receptor, dctp familySAMN02910435_00882Not AvailablePositive907821 - 90889138415.2
trap-type c4-dicarboxylate transport system, small permease componentSAMN02910435_00883Not AvailablePositive908922 - 90944018719.2
transcriptional regulator, laci familySAMN02910435_00884Not AvailableNegative909516 - 91059239785.9
pyruvate dehydrogenase e1 component alpha subunitSAMN02910435_00885Not AvailablePositive910832 - 91181235607.4
pyruvate dehydrogenase e1 component beta subunitSAMN02910435_00886Not AvailablePositive911812 - 91288238767.1

Displaying genes 921 – 930 of 2550 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.