Ruminococcaceae bacterium D5

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Ruminococcaceae bacterium D5 is a member of the Ruminococcaceae family, which is notable for its role in the gut microbiota of various hosts. This bacterium has a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and efficiency in its ecological niche. The genome of Ruminococcaceae bacterium D5 can be accessed through the accession number FORK00000000.1. Members of the Ruminococcaceae family are known to be involved in the fermentation of complex carbohydrates, which plays a crucial role in the digestion and metabolism of dietary fibers in the gut. These bacteria contribute to the production of short-chain fatty acids, which are beneficial for gut health and have various systemic effects on host metabolism. The presence of Ruminococcaceae bacterium D5 in the gut microbiota highlights the importance of microbial diversity and composition in maintaining a balanced ecosystem within the gastrointestinal tract. This bacterium may interact with other microbial species, contributing to the overall functionality of the microbiome. Given its specific traits, Ruminococcaceae bacterium D5 could serve as a valuable model organism for studying the roles of gut microbiota in health and disease. Understanding its functions and interactions could provide insights into the complexities of microbial ecosystems and their influence on the host's metabolic processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcaceae bacterium D5 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2453 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetamidase/formamidaseSAMN02910435_00180Not AvailableNegative182965 - 18425745700.7
sodium/pantothenate symporterSAMN02910435_00181Not AvailableNegative184273 - 18573652942.1
protein of unknown functionSAMN02910435_00182Not AvailableNegative185736 - 1859999636.1
transcriptional regulator, iclr familySAMN02910435_00183Not AvailableNegative186266 - 18702728208.8
probable dna metabolism proteinSAMN02910435_00184Not AvailableNegative188308 - 18909930000.2
putative dna modification/repair radical sam proteinSAMN02910435_00185Not AvailableNegative189078 - 19038548984.2
transcriptional regulator, tetr familySAMN02910435_00186Not AvailablePositive191045 - 19164123127.8
glycosyltransferase involved in cell wall bisynthesisSAMN02910435_00187Not AvailablePositive191641 - 19244731155.9
cell division protease ftshSAMN02910435_00188Not AvailablePositive192473 - 19429065869.2
atp-dependent helicase/nuclease subunit bSAMN02910435_00189Not AvailablePositive194488 - 197790120905.0

Displaying genes 261 – 270 of 2550 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.