Ruminococcaceae bacterium D5

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Ruminococcaceae bacterium D5 is a member of the Ruminococcaceae family, which is notable for its role in the gut microbiota of various hosts. This bacterium has a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and efficiency in its ecological niche. The genome of Ruminococcaceae bacterium D5 can be accessed through the accession number FORK00000000.1. Members of the Ruminococcaceae family are known to be involved in the fermentation of complex carbohydrates, which plays a crucial role in the digestion and metabolism of dietary fibers in the gut. These bacteria contribute to the production of short-chain fatty acids, which are beneficial for gut health and have various systemic effects on host metabolism. The presence of Ruminococcaceae bacterium D5 in the gut microbiota highlights the importance of microbial diversity and composition in maintaining a balanced ecosystem within the gastrointestinal tract. This bacterium may interact with other microbial species, contributing to the overall functionality of the microbiome. Given its specific traits, Ruminococcaceae bacterium D5 could serve as a valuable model organism for studying the roles of gut microbiota in health and disease. Understanding its functions and interactions could provide insights into the complexities of microbial ecosystems and their influence on the host's metabolic processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcaceae bacterium D5 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2453 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cupin domain proteinSAMN02910435_02394Not AvailableNegative2468102 - 246843412184.8
ferredoxinSAMN02910435_02395Not AvailableNegative2468453 - 24686416095.41
hypothetical proteinSAMN02910435_02396Not AvailableNegative2468899 - 24691268584.3
two component transcriptional regulator, lyttr familySAMN02910435_02397Not AvailablePositive2469300 - 247002228332.9
arac-type dna-binding proteinSAMN02910435_02398Not AvailablePositive2470318 - 247119033846.6
mfs transporter, dha3 family, macrolide efflux proteinSAMN02910435_02399Not AvailablePositive2471187 - 247241343275.3
Trna-argNot AvailableNot AvailablePositive2472661 - 2472737Not Available
cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebscSAMN02910435_02401Not AvailablePositive2472928 - 247341017354.8
glycyl-trna synthetaseSAMN02910435_02402Not AvailablePositive2473507 - 247490753957.8
alanine racemaseSAMN02910435_02403Not AvailablePositive2475017 - 247618341904.8

Displaying genes 2371 – 2380 of 2550 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.