Albimonas pacifica strain CGMCC 1.11030

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Albimonas

Description

Albimonas pacifica strain CGMCC 1.11030 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. One notable aspect of Albimonas pacifica is its genomic structure, which comprises a single replicon. This may suggest a streamlined genetic organization, potentially facilitating efficient cellular processes, including replication and gene expression. Furthermore, it is important to note that this strain does not engage in sporulation, indicating a lifestyle that may be more directly reliant on favorable growth conditions without the need for survival tactics employed by spore-forming bacteria. The accession number for this strain is FOQH00000000.1, which provides a reference for researchers interested in genomic studies or further characterization of this organism. From a biological and ecological perspective, the characteristics of Albimonas pacifica strain CGMCC 1.11030 imply it may occupy niches where aerobic conditions prevail and where temperature fluctuations remain moderate. Its non-motility suggests that it may be adapted to stable environments, possibly in aquatic or sedimentary habitats, where it can play a role in nutrient cycling and interactions with other microbial communities. This adds to the understanding of microbial diversity and the ecological roles of non-motile, mesophilic bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAlbimonas
SpeciesAlbimonas pacifica
Strainstrain CGMCC 1.11030

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albimonas pacifica strain CGMCC 1.11030 genome assembly, contig:

Gene Summary

Adenine Count

818067 bp

Thymine Count

816546 bp

Guanine Count

2198343 bp

Cytosine Count

2194231 bp

Genome Length

6027197 bp

Protein-coding Genes

5252 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein ftsi (penicillin-binding protein 3)SAMN05216258_102191Not AvailablePositive925622 - 92759270233.6
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseSAMN05216258_102192Not AvailablePositive927601 - 92911852253.3
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseSAMN05216258_102193Not AvailablePositive929115 - 93058150886.5
phospho-n-acetylmuramoyl-pentapeptide- transferaseSAMN05216258_102194Not AvailablePositive930581 - 93166938479.2
predicted atpaseSAMN05216258_102195Not AvailablePositive931677 - 93223720055.7
udp-n-acetylmuramoylalanine--d-glutamate ligaseSAMN05216258_102196Not AvailablePositive932234 - 93366749711.1
cell division protein ftswSAMN05216258_102197Not AvailablePositive933664 - 93483040956.0
udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferaseSAMN05216258_102198Not AvailablePositive934940 - 93603137175.9
udp-n-acetylmuramate--l-alanine ligaseSAMN05216258_102199Not AvailablePositive936074 - 93751051001.1
amino acid/polyamine/organocation transporter, apc superfamilySAMN05216258_102200Not AvailablePositive937833 - 93909242051.6

Displaying genes 901 – 910 of 5381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.