Albimonas pacifica strain CGMCC 1.11030

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Albimonas

Description

Albimonas pacifica strain CGMCC 1.11030 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. One notable aspect of Albimonas pacifica is its genomic structure, which comprises a single replicon. This may suggest a streamlined genetic organization, potentially facilitating efficient cellular processes, including replication and gene expression. Furthermore, it is important to note that this strain does not engage in sporulation, indicating a lifestyle that may be more directly reliant on favorable growth conditions without the need for survival tactics employed by spore-forming bacteria. The accession number for this strain is FOQH00000000.1, which provides a reference for researchers interested in genomic studies or further characterization of this organism. From a biological and ecological perspective, the characteristics of Albimonas pacifica strain CGMCC 1.11030 imply it may occupy niches where aerobic conditions prevail and where temperature fluctuations remain moderate. Its non-motility suggests that it may be adapted to stable environments, possibly in aquatic or sedimentary habitats, where it can play a role in nutrient cycling and interactions with other microbial communities. This adds to the understanding of microbial diversity and the ecological roles of non-motile, mesophilic bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAlbimonas
SpeciesAlbimonas pacifica
Strainstrain CGMCC 1.11030

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albimonas pacifica strain CGMCC 1.11030 genome assembly, contig:

Gene Summary

Adenine Count

818067 bp

Thymine Count

816546 bp

Guanine Count

2198343 bp

Cytosine Count

2194231 bp

Genome Length

6027197 bp

Protein-coding Genes

5252 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted 5' dna nuclease, flap endonuclease-1-like, helix-3-turn-helix (h3th) domainSAMN05216258_11812Not AvailablePositive5726443 - 572700919852.4
triosephosphate isomeraseSAMN05216258_11813Not AvailableNegative5727147 - 572789024956.5
dna transformation proteinSAMN05216258_11814Not AvailableNegative5728102 - 572844012003.2
iron-sulfur cluster assembly proteinSAMN05216258_11815Not AvailableNegative5728443 - 572879912503.0
chromate transporterSAMN05216258_11816Not AvailablePositive5728958 - 573019940525.9
fes assembly suf system proteinSAMN05216258_11817Not AvailableNegative5730234 - 573059913083.7
pp_05011SAMN05216258_11818Not AvailablePositive5730720 - 5731847Not Available
arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferaseSAMN05216258_11819Not AvailableNegative5732324 - 573322632401.8
dna polymeraseSAMN05216258_11820Not AvailableNegative5733349 - 573479153649.4
putative dna modification/repair radical sam proteinSAMN05216258_11821Not AvailableNegative5734791 - 573603846188.6

Displaying genes 5061 – 5070 of 5381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.