Albimonas pacifica strain CGMCC 1.11030

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Albimonas

Description

Albimonas pacifica strain CGMCC 1.11030 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. One notable aspect of Albimonas pacifica is its genomic structure, which comprises a single replicon. This may suggest a streamlined genetic organization, potentially facilitating efficient cellular processes, including replication and gene expression. Furthermore, it is important to note that this strain does not engage in sporulation, indicating a lifestyle that may be more directly reliant on favorable growth conditions without the need for survival tactics employed by spore-forming bacteria. The accession number for this strain is FOQH00000000.1, which provides a reference for researchers interested in genomic studies or further characterization of this organism. From a biological and ecological perspective, the characteristics of Albimonas pacifica strain CGMCC 1.11030 imply it may occupy niches where aerobic conditions prevail and where temperature fluctuations remain moderate. Its non-motility suggests that it may be adapted to stable environments, possibly in aquatic or sedimentary habitats, where it can play a role in nutrient cycling and interactions with other microbial communities. This adds to the understanding of microbial diversity and the ecological roles of non-motile, mesophilic bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAlbimonas
SpeciesAlbimonas pacifica
Strainstrain CGMCC 1.11030

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albimonas pacifica strain CGMCC 1.11030 genome assembly, contig:

Gene Summary

Adenine Count

818067 bp

Thymine Count

816546 bp

Guanine Count

2198343 bp

Cytosine Count

2194231 bp

Genome Length

6027197 bp

Protein-coding Genes

5252 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chaperone required for the assembly of the f1-atpaseSAMN05216258_11235Not AvailablePositive5193920 - 519463025302.0
uncharacterized domain 1-containing proteinSAMN05216258_11236Not AvailablePositive5194645 - 519514817792.2
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN05216258_11237Not AvailablePositive5195182 - 519602429657.6
putative phosphonate metabolism proteinSAMN05216258_11238Not AvailablePositive5196044 - 519673624674.5
acylphosphataseSAMN05216258_11239Not AvailablePositive5196897 - 519719310631.8
l-glutamine-binding protein /l-glutamate-binding protein /l-aspartate-binding protein /l-asparagine-binding proteinSAMN05216258_11240Not AvailablePositive5197546 - 519856836238.9
l-glutamine abc transporter membrane protein /l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein /l-asparagine abc transporter membrane proteinSAMN05216258_11241Not AvailablePositive5198719 - 520043761827.0
l-glutamine abc transporter membrane protein /l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein /l-asparagine abc transporter membrane proteinSAMN05216258_11242Not AvailablePositive5200437 - 520174447342.9
l-glutamine abc transporter atp-binding protein /l-glutamate abc transporter atp-binding protein /l-aspartate abc transporter atp-binding protein /l-asparagine abc transporter atp-binding proteinSAMN05216258_11243Not AvailablePositive5201767 - 520256430084.6
hypothetical proteinSAMN05216258_11244Not AvailablePositive5202864 - 520368228527.6

Displaying genes 4591 – 4600 of 5381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.