Albimonas pacifica strain CGMCC 1.11030

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Albimonas

Description

Albimonas pacifica strain CGMCC 1.11030 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. One notable aspect of Albimonas pacifica is its genomic structure, which comprises a single replicon. This may suggest a streamlined genetic organization, potentially facilitating efficient cellular processes, including replication and gene expression. Furthermore, it is important to note that this strain does not engage in sporulation, indicating a lifestyle that may be more directly reliant on favorable growth conditions without the need for survival tactics employed by spore-forming bacteria. The accession number for this strain is FOQH00000000.1, which provides a reference for researchers interested in genomic studies or further characterization of this organism. From a biological and ecological perspective, the characteristics of Albimonas pacifica strain CGMCC 1.11030 imply it may occupy niches where aerobic conditions prevail and where temperature fluctuations remain moderate. Its non-motility suggests that it may be adapted to stable environments, possibly in aquatic or sedimentary habitats, where it can play a role in nutrient cycling and interactions with other microbial communities. This adds to the understanding of microbial diversity and the ecological roles of non-motile, mesophilic bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAlbimonas
SpeciesAlbimonas pacifica
Strainstrain CGMCC 1.11030

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albimonas pacifica strain CGMCC 1.11030 genome assembly, contig:

Gene Summary

Adenine Count

818067 bp

Thymine Count

816546 bp

Guanine Count

2198343 bp

Cytosine Count

2194231 bp

Genome Length

6027197 bp

Protein-coding Genes

5252 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system, cell cycle sensor histidine kinase and response regulator cckaSAMN05216258_10971Not AvailableNegative4464673 - 446728591521.0
16s rrna (cytosine967-c5)-methyltransferaseSAMN05216258_10972Not AvailableNegative4467746 - 446896942678.7
gamma-glutamyltransferase 1 threonine peptidase. merops family t03SAMN05216258_10973Not AvailablePositive4469170 - 447090059083.2
uracil-dna glycosylase, family 4SAMN05216258_10974Not AvailableNegative4471067 - 447172923341.8
uncharacterized conserved protein, laba/duf88 familySAMN05216258_10975Not AvailableNegative4471851 - 447242321777.1
dna-directed rna polymerase subunit omegaSAMN05216258_10976Not AvailablePositive4472979 - 447333813192.4
gtp pyrophosphokinaseSAMN05216258_10977Not AvailablePositive4473394 - 447568884568.1
hypothetical proteinSAMN05216258_10978Not AvailablePositive4475693 - 447631923475.7
pyridoxine 5'-phosphate synthaseSAMN05216258_10979Not AvailablePositive4476475 - 447725728395.1
cytosine/adenosine deaminaseSAMN05216258_10980Not AvailableNegative4477316 - 447866547418.9

Displaying genes 3971 – 3980 of 5381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.