Albimonas pacifica strain CGMCC 1.11030

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Albimonas

Description

Albimonas pacifica strain CGMCC 1.11030 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. One notable aspect of Albimonas pacifica is its genomic structure, which comprises a single replicon. This may suggest a streamlined genetic organization, potentially facilitating efficient cellular processes, including replication and gene expression. Furthermore, it is important to note that this strain does not engage in sporulation, indicating a lifestyle that may be more directly reliant on favorable growth conditions without the need for survival tactics employed by spore-forming bacteria. The accession number for this strain is FOQH00000000.1, which provides a reference for researchers interested in genomic studies or further characterization of this organism. From a biological and ecological perspective, the characteristics of Albimonas pacifica strain CGMCC 1.11030 imply it may occupy niches where aerobic conditions prevail and where temperature fluctuations remain moderate. Its non-motility suggests that it may be adapted to stable environments, possibly in aquatic or sedimentary habitats, where it can play a role in nutrient cycling and interactions with other microbial communities. This adds to the understanding of microbial diversity and the ecological roles of non-motile, mesophilic bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAlbimonas
SpeciesAlbimonas pacifica
Strainstrain CGMCC 1.11030

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albimonas pacifica strain CGMCC 1.11030 genome assembly, contig:

Gene Summary

Adenine Count

818067 bp

Thymine Count

816546 bp

Guanine Count

2198343 bp

Cytosine Count

2194231 bp

Genome Length

6027197 bp

Protein-coding Genes

5252 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydropyrimidinaseSAMN05216258_101100Not AvailablePositive123875 - 12533552018.1
asp/glu/hydantoin racemaseSAMN05216258_101101Not AvailablePositive125332 - 12599722839.8
mfs transporter, putative signal transducerSAMN05216258_101102Not AvailableNegative126044 - 12726440378.2
iron complex outermembrane recepter proteinSAMN05216258_101103Not AvailableNegative127264 - 12937876239.3
nadph-dependent ferric siderophore reductase, contains fad-binding and sip domainsSAMN05216258_101104Not AvailableNegative129527 - 13056135600.6
thioredoxinSAMN05216258_101105Not AvailableNegative130781 - 13121515137.6
hypothetical proteinSAMN05216258_101106Not AvailableNegative131313 - 13164211799.0
kynurenine formamidaseSAMN05216258_101107Not AvailablePositive131803 - 13270531807.4
cholesterol oxidaseSAMN05216258_101108Not AvailablePositive132752 - 13426054066.5
amidaseSAMN05216258_101109Not AvailableNegative134327 - 13580552650.0

Displaying genes 231 – 240 of 5381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.