Albimonas pacifica strain CGMCC 1.11030

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Albimonas

Description

Albimonas pacifica strain CGMCC 1.11030 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. One notable aspect of Albimonas pacifica is its genomic structure, which comprises a single replicon. This may suggest a streamlined genetic organization, potentially facilitating efficient cellular processes, including replication and gene expression. Furthermore, it is important to note that this strain does not engage in sporulation, indicating a lifestyle that may be more directly reliant on favorable growth conditions without the need for survival tactics employed by spore-forming bacteria. The accession number for this strain is FOQH00000000.1, which provides a reference for researchers interested in genomic studies or further characterization of this organism. From a biological and ecological perspective, the characteristics of Albimonas pacifica strain CGMCC 1.11030 imply it may occupy niches where aerobic conditions prevail and where temperature fluctuations remain moderate. Its non-motility suggests that it may be adapted to stable environments, possibly in aquatic or sedimentary habitats, where it can play a role in nutrient cycling and interactions with other microbial communities. This adds to the understanding of microbial diversity and the ecological roles of non-motile, mesophilic bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAlbimonas
SpeciesAlbimonas pacifica
Strainstrain CGMCC 1.11030

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albimonas pacifica strain CGMCC 1.11030 genome assembly, contig:

Gene Summary

Adenine Count

818067 bp

Thymine Count

816546 bp

Guanine Count

2198343 bp

Cytosine Count

2194231 bp

Genome Length

6027197 bp

Protein-coding Genes

5252 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216258_103322Not AvailablePositive1776128 - 17763407062.06
polyhydroxyalkanoate synthaseSAMN05216258_103323Not AvailablePositive1776447 - 177765242441.1
acetyl-coa acetyltransferaseSAMN05216258_103324Not AvailablePositive1777916 - 177909140165.4
3-oxoacyl-[acyl-carrier-protein] reductaseSAMN05216258_103325Not AvailablePositive1779334 - 178005625223.2
permease of the drug/metabolite transporter (dmt) superfamilySAMN05216258_103326Not AvailablePositive1780303 - 178126834385.1
cobalt transporter subunit cbtbSAMN05216258_103328Not AvailablePositive1781611 - 17817845889.01
cobalt transporter subunit cbtaSAMN05216258_103329Not AvailablePositive1781789 - 178263728122.2
cobalamin biosynthesis protein cobwSAMN05216258_103330Not AvailablePositive1782750 - 178386539229.2
cobaltochelatase cobn subunitSAMN05216258_103331Not AvailablePositive1783865 - 1787560132236.0
uncharacterized conserved proteinSAMN05216258_103332Not AvailablePositive1787557 - 178794314198.7

Displaying genes 1611 – 1620 of 5381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.